.. _`matindex_test`: ==================== CoSMoMVPA unit tests ==================== .. toctree:: :maxdepth: 2 :hidden: matlab/test_align matlab/test_anova_feature_selector matlab/test_average_samples matlab/test_balance_dataset matlab/test_balance_partitions matlab/test_cartprod matlab/test_check_dataset matlab/test_check_external matlab/test_check_neighborhood matlab/test_check_partitions matlab/test_chunkize matlab/test_classify matlab/test_cluster_neighborhood matlab/test_clusterize matlab/test_config matlab/test_confusion_matrix matlab/test_convert_neighborhood matlab/test_corr matlab/test_correlation_measure matlab/test_cosmo_dataset_operations matlab/test_cosmo_fmri_dataset matlab/test_cosmo_notify_test_skipped matlab/test_cosmo_skip_test_if_no_external matlab/test_cross_neighborhood matlab/test_crossvalidate matlab/test_crossvalidation_measure matlab/test_dim_find matlab/test_dim_generalization_measure matlab/test_dim_insert matlab/test_dim_match matlab/test_dim_prune matlab/test_dim_remove matlab/test_dim_rename matlab/test_dim_slice matlab/test_dim_transpose matlab/test_dir matlab/test_disp matlab/test_dissimilarity_matrix_measure matlab/test_distatis matlab/test_external_neuroelf matlab/test_external_surfing matlab/test_find_local_extrema matlab/test_flatten matlab/test_fmri_convert_xform matlab/test_fmri_dataset matlab/test_fmri_deoblique matlab/test_fmri_io matlab/test_fmri_orientation matlab/test_fx matlab/test_independent_samples_partitioner matlab/test_index_unique matlab/test_interval_neighborhood matlab/test_isequaln matlab/test_isfield matlab/test_map_pca matlab/test_mask_dim_intersect matlab/test_match matlab/test_measure_clusters matlab/test_meeg_baseline_correct matlab/test_meeg_chan_neighborhood matlab/test_meeg_chan_neighbors matlab/test_meeg_chantype matlab/test_meeg_find_layout matlab/test_meeg_io matlab/test_meeg_layout_collection matlab/test_meeg_read_layout matlab/test_meeg_senstype_collection matlab/test_meeg_source matlab/test_montecarlo_cluster_stat matlab/test_montecarlo_cluster_stat_distribution matlab/test_montecarlo_phase_stat matlab/test_naive_bayes_classifier_searchlight matlab/test_neighborhood_split matlab/test_normalize matlab/test_norminv matlab/test_oddeven_partitioner matlab/test_parallel_get_nproc_available matlab/test_parcellfun matlab/test_partitions matlab/test_pca matlab/test_pdist matlab/test_phase_itc matlab/test_phase_stat matlab/test_plot_slices matlab/test_publish_run_scripts matlab/test_rand matlab/test_randomize_targets matlab/test_randperm matlab/test_remove_useless_data matlab/test_run_tests matlab/test_sample_unique matlab/test_searchlight matlab/test_show_progress matlab/test_singleton_neighborhood matlab/test_slice matlab/test_spherical_neighborhood matlab/test_split matlab/test_squareform matlab/test_stack matlab/test_stat matlab/test_statcode matlab/test_strjoin matlab/test_strsplit matlab/test_structjoin matlab/test_surface_io matlab/test_surficial_io_gifti matlab/test_surficial_io_niml_dset matlab/test_surficial_neighborhood matlab/test_synthetic_dataset matlab/test_tail matlab/test_target_dsm_corr_measure matlab/test_tiedrank matlab/test_type matlab/test_vol_coordinates matlab/test_vol_grid_convert matlab/test_warning matlab/test_wtf ================================================ ==================================================================================================================== ------------------------------------------------ -------------------------------------------------------------------------------------------------------------------- **All functions** ------------------------------------------------ -------------------------------------------------------------------------------------------------------------------- :ref:`test_align` tests for cosmo_align :ref:`test_anova_feature_selector` tests for cosmo_anova_feature_selector :ref:`test_average_samples` tests for cosmo_average_samples :ref:`test_balance_dataset` tests for cosmo_average_samples :ref:`test_balance_partitions` tests for cosmo_balance_partitions :ref:`test_cartprod` tests for cosmo_cartprod :ref:`test_check_dataset` tests for cosmo_check_dataset :ref:`test_check_external` tests for cosmo_check_external :ref:`test_check_neighborhood` tests for cosmo_check_neighborhood :ref:`test_check_partitions` tests for cosmo_check_partitions :ref:`test_chunkize` tests for cosmo_chunkize :ref:`test_classify` tests for cosmo_classify_* functions :ref:`test_cluster_neighborhood` tests for cosmo_cluster_neighborhood :ref:`test_clusterize` tests for cosmo_clusterize :ref:`test_config` tests for cosmo_config :ref:`test_confusion_matrix` tests for cosmo_confusion_matrix :ref:`test_convert_neighborhood` tests for cosmo_convert_neighborhood :ref:`test_corr` tests for cosmo_corr :ref:`test_correlation_measure` tests for cosmo_correlation_measure :ref:`test_cosmo_dataset_operations` tests for slicing and stacking :ref:`test_cosmo_fmri_dataset` tests for cosmo_fmri_dataset :ref:`test_cosmo_notify_test_skipped` tests for cosmo_align :ref:`test_cosmo_skip_test_if_no_external` tests for cosmo_align :ref:`test_cross_neighborhood` tests for cosmo_cross_neighborhood :ref:`test_crossvalidate` tests for test_crossvalidate :ref:`test_crossvalidation_measure` tests for cosmo_crossvalidation_measure :ref:`test_dim_find` tests for cosmo_dim_find :ref:`test_dim_generalization_measure` tests for cosmo_dim_generalization_measure :ref:`test_dim_insert` tests for cosmo_dim_insert :ref:`test_dim_match` tests for cosmo_dim_match :ref:`test_dim_prune` tests for cosmo_dim_prune :ref:`test_dim_remove` tests for cosmo_dim_remove :ref:`test_dim_rename` tests for cosmo_dim_rename :ref:`test_dim_slice` tests for cosmo_dim_slice :ref:`test_dim_transpose` tests for cosmo_dim_transpose :ref:`test_dir` tests for cosmo_dir :ref:`test_disp` tests for cosmo_disp :ref:`test_dissimilarity_matrix_measure` tests for cosmo_dissimilarity_matrix_measure :ref:`test_distatis` tests for cosmo_distatis :ref:`test_external_neuroelf` regression tests for external "neuroelf" toolbox :ref:`test_external_surfing` regression tests for external "surfing" toolbox :ref:`test_find_local_extrema` tests for cosmo_find_local_extrema :ref:`test_flatten` tests for cosmo_flatten :ref:`test_fmri_convert_xform` tests for cosmo_fmri_convert_xform :ref:`test_fmri_dataset` tests for cosmo_fmri_dataset :ref:`test_fmri_deoblique` tests for cosmo_fmri_deoblique :ref:`test_fmri_io` tests for fmri input/output :ref:`test_fmri_orientation` tests for cosmo_fmri_orientation :ref:`test_fx` tests for cosmo_fx :ref:`test_independent_samples_partitioner` tests for cosmo_independent_samples_partitioner :ref:`test_index_unique` tests for cosmo_index_unique :ref:`test_interval_neighborhood` tests for cosmo_interval_neighborhood :ref:`test_isequaln` tests for cosmo_isequaln :ref:`test_isfield` tests for cosmo_isfield :ref:`test_map_pca` tests for cosmo_map_pca :ref:`test_mask_dim_intersect` tests for test_mask_dim_intersect :ref:`test_match` tests for cosmo_match :ref:`test_measure_clusters` tests for cosmo_measure_clusters :ref:`test_meeg_baseline_correct` tests for cosmo_meeg_baseline_correct :ref:`test_meeg_chan_neighborhood` tests for cosmo_meeg_chan_neighborhood :ref:`test_meeg_chan_neighbors` tests for cosmo_meeg_chan_neighbors :ref:`test_meeg_chantype` tests for cosmo_meeg_chantype :ref:`test_meeg_find_layout` tests for cosmo_meeg_find_layout :ref:`test_meeg_io` tests for MEEG input/output :ref:`test_meeg_layout_collection` tests for cosmo_meeg_layout_collection :ref:`test_meeg_read_layout` regression tests for meeg_read_layout :ref:`test_meeg_senstype_collection` tests for cosmo_meeg_senstype_collection :ref:`test_meeg_source` tests for MEEG datasets in source space :ref:`test_montecarlo_cluster_stat` tests for cosmo_montecarlo_cluster_stat :ref:`test_montecarlo_cluster_stat_distribution` probability uniformity tests for cosmo_montecarlo_cluster_stat :ref:`test_montecarlo_phase_stat` tests for test_phase_stat :ref:`test_naive_bayes_classifier_searchlight` tests for cosmo_naive_bayes_classifier_searchlight :ref:`test_neighborhood_split` tests for cosmo_neighborhood_split :ref:`test_normalize` tests for cosmo_normalize :ref:`test_norminv` tests for cosmo_norminv :ref:`test_oddeven_partitioner` tests for cosmo_oddeven_partitioner :ref:`test_parallel_get_nproc_available` tests for cosmo_parallel_get_nproc_available :ref:`test_parcellfun` tests for cosmo_cartprod :ref:`test_partitions` tests for partitioning functions :ref:`test_pca` tests for cosmo_pca :ref:`test_pdist` tests for cosmo_pdist :ref:`test_phase_itc` tests for test_phase_itc :ref:`test_phase_stat` tests for test_phase_stat :ref:`test_plot_slices` tests for plot_slices :ref:`test_publish_run_scripts` smoke tests for publish_run_scripts (using dry-run); currently no files are actually generated by this test function :ref:`test_rand` tests for cosmo_rand :ref:`test_randomize_targets` tests for cosmo_randomize_targets :ref:`test_randperm` tests for cosmo_randperm :ref:`test_remove_useless_data` tests for cosmo_remove_useless_data :ref:`test_run_tests` tests for cosmo_run_tests :ref:`test_sample_unique` tests for cosmo_sample_unique :ref:`test_searchlight` tests for cosmo_searchlight :ref:`test_show_progress` tests for cosmo_show_progress :ref:`test_singleton_neighborhood` tests for test_singleton_neighborhood :ref:`test_slice` tests for cosmo_slice :ref:`test_spherical_neighborhood` tests for cosmo_spherical_neighborhood :ref:`test_split` tests for cosmo_split :ref:`test_squareform` tests for cosmo_squareform :ref:`test_stack` tests for cosmo_stack :ref:`test_stat` tests for cosmo_stat :ref:`test_statcode` tests for cosmo_statcode :ref:`test_strjoin` tests for cosmo_strjoin :ref:`test_strsplit` tests for cosmo_strsplit :ref:`test_structjoin` tests for cosmo_structjoin :ref:`test_surface_io` tests for surface input/output :ref:`test_surficial_io_gifti` tests for GIFTI input/output :ref:`test_surficial_io_niml_dset` tests for AFNI NIML input/output :ref:`test_surficial_neighborhood` tests for cosmo_surficial_neighborhood :ref:`test_synthetic_dataset` tests for cosmo_synthetic_dataset :ref:`test_tail` tests for cosmo_tail :ref:`test_target_dsm_corr_measure` tests for cosmo_target_dsm_corr_measure :ref:`test_tiedrank` tests for cosmo_tiedrank :ref:`test_type` tests for cosmo_type :ref:`test_vol_coordinates` tests for cosmo_vol_coordinates :ref:`test_vol_grid_convert` tests for cosmo_vol_grid_convert :ref:`test_warning` tests for cosmo_warning :ref:`test_wtf` tests for cosmo_wtf ================================================ ====================================================================================================================